MGYG000308381

Taxonomy

Acutalibacter ornithocaccae Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Acutalibacter > Acutalibacter ornithocaccae

Cluster representative

MGYG000310807

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310807 on MGnify
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Annotations

MGYG000308381’s cluster representative genome MGYG000310807 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310807 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308381 Copy API Endpoint

MGYG000308381’s cluster representative (MGYG000310807) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310807’s sequence. Because MGYG000308381 has been clustered with MGYG000310807 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308381.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310807

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025259	SAMEA112905304	Prebiotic
0.99	SAMEA7697583	SAMEA112904905	Probiotic
0.99	SAMEA9449947	SAMEA112905276	Prebiotic
0.99	SAMEA10145583	SAMEA112904929	Control
0.99	SAMEA7697581	SAMEA112905343	Probiotic
0.99	SAMEA7025260	SAMEA112905317	Prebiotic
0.99	SAMEA7697602	SAMEA112905015	Probiotic
0.99	SAMEA10104957	SAMEA112904999	Control
0.99	SAMEA7025254	SAMEA112904883	Prebiotic
0.99	SAMEA14409936	SAMEA112904743	Control