HoloFood Data Portal

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Details for MGYG000308385, a genome assembled from HoloFood chicken metagenomes

Genome details
Gallispira edinburgensis Bacteria > Firmicutes_A > Clostridia > Lachnospirales > CAG-274 > Gallispira > Gallispira edinburgensis
Cluster representative


Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318258 on MGnify
 Show other genomes in cluster

MGYG000308385’s cluster representative genome MGYG000318258 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318258 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308385 Copy API Endpoint
Samples containing this genome

MGYG000308385’s cluster representative (MGYG000318258) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318258’s sequence. Because MGYG000308385 has been clustered with MGYG000318258 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308385.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318258

 Download all as TSV
Containment Sample accession Animal accession Treatment
1.00 SAMEA7697588 Probiotic
1.00 SAMEA7025263 Control
1.00 SAMEA10158026 Control
0.99 SAMEA7025259 Prebiotic
0.99 SAMEA9449922 Control
0.99 SAMEA9449945 Prebiotic
0.99 SAMEA7571791 Control
0.99 SAMEA10104979 Probiotic
0.99 SAMEA10105036 Probiotic
0.99 SAMEA7571802 Control