HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

MGYG000310215

Details for MGYG000310215, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia pullicola Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia > Blautia pullicola
Cluster representative

MGYG000311274

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311274 on MGnify
 Show other genomes in cluster
Annotations

MGYG000310215’s cluster representative genome MGYG000311274 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311274 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000310215 Copy API Endpoint
Samples containing this genome

MGYG000310215’s cluster representative (MGYG000311274) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311274’s sequence. Because MGYG000310215 has been clustered with MGYG000311274 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000310215.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311274

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Containment Sample accession Animal accession Treatment
0.80 SAMEA9449939 Prebiotic
0.80 SAMEA10454447 Prebiotic
0.80 SAMEA10105026 Control
0.80 SAMEA10158026 Control
0.80 SAMEA7571769 Prebiotic
0.79 SAMEA7571827 Probiotic
0.79 SAMEA7722474 Prebiotic
0.79 SAMEA10105035 Probiotic
0.79 SAMEA10105031 Control
0.79 SAMEA9449918 Probiotic