HoloFood Data Portal

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SAMEA112904740: a HoloFood chicken host

Data available for SAMEA112904740


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112904740 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904740, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.21 g
Average Daily Feed intake: Day 00 - 35 64.57 g
Average Daily Feed intake: Day 07 - 21 58.89 g
Average Daily Feed intake: Day 21 - 35 94.79 g
Average Daily Gain: Day 00 - 07 20.44 g
Average Daily Gain: Day 00 - 35 44.64 g
Average Daily Gain: Day 07 - 21 43.46 g
Average Daily Gain: Day 21 - 35 57.92 g
Average European Performance Efficiency Factor: Day 00 - 07 197.01 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.355 None
Average Feed to Conversion Ratio: Day 07 - 21 1.355 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 43.66 g
Average body weight at day 07 186.76 g
Average body weight at day 21 795.16 g
Average body weight at day 35 1606 g
European Performance Efficiency Factor: Day 00 - 35 300.9 None
European Performance Efficiency Factor: Day 07 - 21 320.69 None
European Performance Efficiency Factor: Day 21 - 35 342.47 None
FCR (not corrected): Day 00 - 07 1.038 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.472 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.702 None
Feed to Conversion Ratio: Day 00 - 07 1.038 g/g
Feed to Conversion Ratio: Day 00 - 35 1.446 g/g
Feed to Conversion Ratio: Day 21 - 35 1.637 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 6.44 pH
Litter at Day 21 7.72 pH
Litter at Day 35 8.44 pH
Mean Abdominal fat Yield 1.22 %
Mean Abdominal fat weight 22.03 g
Mean Breast Yield 15.58 %
Mean Breast weight 283.78 g
Mean CRP at Day 07 2.2005 pg/mg
Mean CRP at Day 21 3.1466 pg/mg
Mean CRP at Day 35 1.358 pg/mg
Mean Carcass Weight 1301.6 g
Mean Carcass Yield 72.46 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.59161 ng/ml
Mean HPT at Day 35 0.74221 ng/ml
Mean LPS at Day 07 4.8098 ng/L
Mean LPS at Day 21 3.3193 ng/L
Mean LPS at Day 35 3.1227 ng/L
Mean Legs Yield 20.05 %
Mean Legs weight 362.6 g
Mean TBARS 0.04 mg MDA/kg
Mean carcass body weight 1783.3 g
Mean feather cortisol at Day 07 8.435 pg/mg
Mean feather cortisol at Day 21 8.9183 pg/mg
Mean feather cortisol at Day 35 7.01 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 3.23 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 3.23 %
Pen code CC10 None

Sample metadata

Marker Measurement Units
Animal code CC10.05 None
Breed Ross None
C-Reactive protein 3.85 pg/ml
Chicken body weight 217.4 g
Feather cortisol 7.37 pg/mg
Haptoglobin 4.94 ng/ml
Lipopolysaccharide 20.56 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None