HoloFood Data Portal

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SAMEA112904967: a HoloFood chicken host

Data available for SAMEA112904967


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
Has transcriptome data Has transcriptome data
View 7 derived samples
API endpoint
/api/animals/SAMEA112904967 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904967, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.93 g
Average Daily Feed intake: Day 00 - 35 82.36 g
Average Daily Feed intake: Day 07 - 21 72.61 g
Average Daily Feed intake: Day 21 - 35 126.31 g
Average Daily Gain: Day 00 - 07 21.96 g
Average Daily Gain: Day 00 - 35 57.56 g
Average Daily Gain: Day 07 - 21 55.72 g
Average Daily Gain: Day 21 - 35 77.2 g
Average European Performance Efficiency Factor: Day 00 - 07 219.97 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.323 None
Average Feed to Conversion Ratio: Day 07 - 21 1.303 g/g
Average Mortality without culleds: Day 07 - 21 5.41 %
Average body weight at day 00 43.82 g
Average body weight at day 07 197.57 g
Average body weight at day 21 977.59 g
Average body weight at day 35 2058.3 g
European Performance Efficiency Factor: Day 00 - 35 382.14 None
European Performance Efficiency Factor: Day 07 - 21 404.41 None
European Performance Efficiency Factor: Day 21 - 35 471.8 None
FCR (not corrected): Day 00 - 07 0.999 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.44 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.636 None
Feed to Conversion Ratio: Day 00 - 07 0.999 g/g
Feed to Conversion Ratio: Day 00 - 35 1.431 g/g
Feed to Conversion Ratio: Day 21 - 35 1.636 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=96.15 P1=3.85 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=60.00 P1=10.00 P2=20.00 P3=10.00 P4=0.00 %
Litter at Day 07 6.34 pH
Litter at Day 21 6.66 pH
Litter at Day 35 8.43 pH
Mean Abdominal fat Yield 1.56 %
Mean Abdominal fat weight 33.6 g
Mean Breast Yield 19.22 %
Mean Breast weight 415.23 g
Mean CRP at Day 07 2.1753 pg/mg
Mean CRP at Day 21 1.2705 pg/mg
Mean CRP at Day 35 1.1022 pg/mg
Mean Carcass Weight 1681.5 g
Mean Carcass Yield 77.94 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.79538 ng/ml
Mean HPT at Day 35 0.61203 ng/ml
Mean LPS at Day 07 4.0573 ng/L
Mean LPS at Day 21 6.8403 ng/L
Mean LPS at Day 35 3.0688 ng/L
Mean Legs Yield 20.58 %
Mean Legs weight 442.52 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 2158.3 g
Mean feather cortisol at Day 07 7.805 pg/mg
Mean feather cortisol at Day 21 11.803 pg/mg
Mean feather cortisol at Day 35 9.9617 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 5 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 5.41 %
Mortality: Day 21 - 35 0 %
Pen code CC05 None

Sample metadata

Marker Measurement Units
Animal code CC05.03 None
Breed Cobb None
C-Reactive protein 5.52 pg/ml
Chicken body weight 151.3 g
Feather cortisol 7.42 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 20.68 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None