MGYG000320873

Taxonomy

Blautia_A intestinigallinarum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia_A > Blautia_A intestinigallinarum

Cluster representative

MGYG000310290

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310290 on MGnify
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Annotations

MGYG000320873’s cluster representative genome MGYG000310290 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310290 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320873 Copy API Endpoint

MGYG000320873’s cluster representative (MGYG000310290) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310290’s sequence. Because MGYG000320873 has been clustered with MGYG000310290 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320873.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310290

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025259	SAMEA112905304	Prebiotic
1.00	SAMEA7025266	SAMEA112905005	Probiotic
1.00	SAMEA10105015	SAMEA112904826	Probiotic
1.00	SAMEA10455494	SAMEA112905043	Control
0.99	SAMEA10159272	SAMEA112905386	Probiotic
0.99	SAMEA9449872	SAMEA112904787	Prebiotic
0.98	SAMEA9449922	SAMEA112904890	Control
0.98	SAMEA7025260	SAMEA112905317	Prebiotic
0.98	SAMEA10104970	SAMEA112905205	Probiotic
0.98	SAMEA7025263	SAMEA112905147	Control