HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904826: a HoloFood chicken host

Data available for SAMEA112904826


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904826 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904826, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.64 g
Average Daily Feed intake: Day 00 - 35 88.59 g
Average Daily Feed intake: Day 07 - 21 72.86 g
Average Daily Feed intake: Day 21 - 35 141.74 g
Average Daily Gain: Day 00 - 07 18.1 g
Average Daily Gain: Day 00 - 35 57.88 g
Average Daily Gain: Day 07 - 21 52.17 g
Average Daily Gain: Day 21 - 35 83.46 g
Average European Performance Efficiency Factor: Day 00 - 07 166.84 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.396 None
Average Feed to Conversion Ratio: Day 07 - 21 1.396 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 45.78 g
Average body weight at day 07 172.5 g
Average body weight at day 21 902.94 g
Average body weight at day 35 2071.4 g
European Performance Efficiency Factor: Day 00 - 35 378.11 None
European Performance Efficiency Factor: Day 07 - 21 373.62 None
European Performance Efficiency Factor: Day 21 - 35 491.49 None
FCR (not corrected): Day 00 - 07 1.085 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.531 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.698 None
Feed to Conversion Ratio: Day 00 - 07 1.085 g/g
Feed to Conversion Ratio: Day 00 - 35 1.531 g/g
Feed to Conversion Ratio: Day 21 - 35 1.698 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=88.24 P1=11.76 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=89.29 P1=10.71 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.71 pH
Litter at Day 21 8.13 pH
Litter at Day 35 7.4 pH
Mean Abdominal fat Yield 2.18 %
Mean Abdominal fat weight 52.93 g
Mean Breast Yield 20.4 %
Mean Breast weight 493.65 g
Mean CRP at Day 07 1.353 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1841.1 g
Mean Carcass Yield 76.11 %
Mean HPT at Day 07 1.625 ng/ml
Mean HPT at Day 21 1.092 ng/ml
Mean HPT at Day 35 0.7617 ng/ml
Mean LPS at Day 07 5.9984 ng/L
Mean LPS at Day 21 5.1991 ng/L
Mean LPS at Day 35 5.8699 ng/L
Mean Legs Yield 19.38 %
Mean Legs weight 469.08 g
Mean TBARS 0.14 mg MDA/kg
Mean carcass body weight 2417.5 g
Mean feather cortisol at Day 07 11.4 pg/mg
Mean feather cortisol at Day 21 18.013 pg/mg
Mean feather cortisol at Day 35 14.522 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB23 None

Sample metadata

Marker Measurement Units
Animal code CB23.05 None
Breed Cobb None
C-Reactive protein 0.89 pg/ml
Chicken body weight 226.8 g
Feather cortisol 9.69 pg/mg
Haptoglobin 22.35 ng/ml
Lipopolysaccharide 27.84 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None