MGYG000313352

Taxonomy

Bacteroides fragilis_A Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides fragilis_A

Cluster representative

MGYG000317725

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317725 on MGnify
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Annotations

MGYG000313352’s cluster representative genome MGYG000317725 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317725 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313352 Copy API Endpoint

MGYG000313352’s cluster representative (MGYG000317725) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317725’s sequence. Because MGYG000313352 has been clustered with MGYG000317725 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313352.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317725

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10105062	SAMEA112904786	Prebiotic
1.00	SAMEA10105020	SAMEA112905280	Probiotic
1.00	SAMEA7571846	SAMEA112905179	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA10105037	SAMEA112904745	Probiotic
1.00	SAMEA7571858	SAMEA112904840	Probiotic
1.00	SAMEA7571823	SAMEA112904842	Probiotic
1.00	SAMEA10105063	SAMEA112904805	Prebiotic
1.00	SAMEA9449925	SAMEA112904993	Prebiotic
1.00	SAMEA10105026	SAMEA112905315	Control