HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

MGYG000308735

Details for MGYG000308735, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia_A Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia_A
Cluster representative

MGYG000308735

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000308735 on MGnify
 Show other genomes in cluster
Annotations

MGYG000308735’s cluster representative genome MGYG000308735 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000308735 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308735 Copy API Endpoint
Samples containing this genome

MGYG000308735’s cluster representative (MGYG000308735) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000308735’s sequence. Because MGYG000308735 has been clustered with MGYG000308735 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308735.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000308735

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Containment Sample accession Animal accession Treatment
0.34 SAMEA7697584 Control
0.34 SAMEA10104941 Probiotic
0.33 SAMEA7697581 Probiotic
0.33 SAMEA9449867 Control
0.33 SAMEA9449873 Prebiotic
0.33 SAMEA10455476 Probiotic
0.33 SAMEA10454444 Probiotic
0.32 SAMEA10145564 Control
0.31 SAMEA10455483 Prebiotic
0.31 SAMEA9449843 Probiotic