HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905056: a HoloFood chicken host

Data available for SAMEA112905056


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 6 derived samples
API endpoint
/api/animals/SAMEA112905056 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905056, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 18.67 g
Average Daily Feed intake: Day 00 - 35 95.06 g
Average Daily Feed intake: Day 07 - 21 64.63 g
Average Daily Feed intake: Day 21 - 35 169.2 g
Average Daily Gain: Day 00 - 07 17.74 g
Average Daily Gain: Day 00 - 35 60.65 g
Average Daily Gain: Day 07 - 21 48.14 g
Average Daily Gain: Day 21 - 35 94.62 g
Average European Performance Efficiency Factor: Day 00 - 07 168.53 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.342 None
Average Feed to Conversion Ratio: Day 07 - 21 1.342 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.87 g
Average body weight at day 07 164.03 g
Average body weight at day 21 838.03 g
Average body weight at day 35 2162.7 g
European Performance Efficiency Factor: Day 00 - 35 367.62 None
European Performance Efficiency Factor: Day 07 - 21 358.63 None
European Performance Efficiency Factor: Day 21 - 35 497.99 None
FCR (not corrected): Day 00 - 07 1.052 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.62 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.899 None
Feed to Conversion Ratio: Day 00 - 07 1.052 g/g
Feed to Conversion Ratio: Day 00 - 35 1.567 g/g
Feed to Conversion Ratio: Day 21 - 35 1.788 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=46.88 P1=12.50 P2=34.38 P3=6.25 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=62.50 P1=25.00 P2=12.50 P3=0.00 P4=0.00 %
Litter at Day 07 5.88 pH
Litter at Day 21 7.49 pH
Litter at Day 35 8.02 pH
Mean Abdominal fat Yield 1.42 %
Mean Abdominal fat weight 36.12 g
Mean Breast Yield 16.99 %
Mean Breast weight 435.16 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1906.2 g
Mean Carcass Yield 75.38 %
Mean HPT at Day 07 1.2488 ng/ml
Mean HPT at Day 21 0.59161 ng/ml
Mean HPT at Day 35 0.64114 ng/ml
Mean LPS at Day 07 3.3958 ng/L
Mean LPS at Day 21 2.9732 ng/L
Mean LPS at Day 35 3.1026 ng/L
Mean Legs Yield 20.93 %
Mean Legs weight 524.46 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 2528 g
Mean feather cortisol at Day 07 13.745 pg/mg
Mean feather cortisol at Day 21 11.503 pg/mg
Mean feather cortisol at Day 35 12.887 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 5 %
Mortality without culleds: Day 21 - 35 5.88 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 5.88 %
Pen code CA11 None

Sample metadata

Marker Measurement Units
Animal code CA11.01 None
Breed Ross None
C-Reactive protein 0.35 pg/ml
Chicken body weight 185.2 g
Feather cortisol 12.04 pg/mg
Haptoglobin 42.1 ng/ml
Lipopolysaccharide 13.1 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None