HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905075: a HoloFood chicken host

Data available for SAMEA112905075


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has histological data Has histological data
Has host genomic data Has host genomic data
View 8 derived samples
API endpoint
/api/animals/SAMEA112905075 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905075, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 18.4 g
Average Daily Feed intake: Day 00 - 35 95.51 g
Average Daily Feed intake: Day 07 - 21 64.4 g
Average Daily Feed intake: Day 21 - 35 170.51 g
Average Daily Gain: Day 00 - 07 16.81 g
Average Daily Gain: Day 00 - 35 58.89 g
Average Daily Gain: Day 07 - 21 47.98 g
Average Daily Gain: Day 21 - 35 90.84 g
Average European Performance Efficiency Factor: Day 00 - 07 149.63 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.361 None
Average Feed to Conversion Ratio: Day 07 - 21 1.342 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.83 g
Average body weight at day 07 156.46 g
Average body weight at day 21 828.19 g
Average body weight at day 35 2099.9 g
European Performance Efficiency Factor: Day 00 - 35 344.92 None
European Performance Efficiency Factor: Day 07 - 21 348.3 None
European Performance Efficiency Factor: Day 21 - 35 483.92 None
FCR (not corrected): Day 00 - 07 1.105 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.631 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.877 None
Feed to Conversion Ratio: Day 00 - 07 1.095 g/g
Feed to Conversion Ratio: Day 00 - 35 1.622 g/g
Feed to Conversion Ratio: Day 21 - 35 1.877 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=90.32 P1=9.68 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=75.00 P1=20.83 P2=4.17 P3=0.00 P4=0.00 %
Litter at Day 07 7.09 pH
Litter at Day 21 7.85 pH
Litter at Day 35 7.87 pH
Mean Abdominal fat Yield 1.28 %
Mean Abdominal fat weight 29.83 g
Mean Breast Yield 17.88 %
Mean Breast weight 416.4 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0959 pg/mg
Mean CRP at Day 35 1.124 pg/mg
Mean Carcass Weight 1756 g
Mean Carcass Yield 75.49 %
Mean HPT at Day 07 1.1234 ng/ml
Mean HPT at Day 21 0.78958 ng/ml
Mean HPT at Day 35 0.63245 ng/ml
Mean LPS at Day 07 3.8422 ng/L
Mean LPS at Day 21 4.0706 ng/L
Mean LPS at Day 35 6.6412 ng/L
Mean Legs Yield 20.99 %
Mean Legs weight 487.83 g
Mean TBARS 0.0467 mg MDA/kg
Mean carcass body weight 2324.7 g
Mean feather cortisol at Day 07 18.98 pg/mg
Mean feather cortisol at Day 21 12.028 pg/mg
Mean feather cortisol at Day 35 17.068 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 2.56 %
Mortality: Day 21 - 35 0 %
Pen code CA21 None

Sample metadata

Marker Measurement Units
Animal code CA21.11 None
Breed Ross None
C-Reactive protein 0.6 pg/ml
Chicken body weight 842 g
Feather cortisol 13.42 pg/mg
Haptoglobin 68 ng/ml
Lipopolysaccharide 18.56 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 21 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None