HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905185: a HoloFood chicken host

Data available for SAMEA112905185


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905185 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905185, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.58 g
Average Daily Feed intake: Day 00 - 35 98.65 g
Average Daily Feed intake: Day 07 - 21 78.15 g
Average Daily Feed intake: Day 21 - 35 161.12 g
Average Daily Gain: Day 00 - 07 18.89 g
Average Daily Gain: Day 00 - 35 64.77 g
Average Daily Gain: Day 07 - 21 56.86 g
Average Daily Gain: Day 21 - 35 95.62 g
Average European Performance Efficiency Factor: Day 00 - 07 161.13 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.374 None
Average Feed to Conversion Ratio: Day 07 - 21 1.374 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 46 g
Average body weight at day 07 178.21 g
Average body weight at day 21 974.24 g
Average body weight at day 35 2313 g
European Performance Efficiency Factor: Day 00 - 35 414.61 None
European Performance Efficiency Factor: Day 07 - 21 413.71 None
European Performance Efficiency Factor: Day 21 - 35 567.5 None
FCR (not corrected): Day 00 - 07 1.151 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.524 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.685 None
Feed to Conversion Ratio: Day 00 - 07 1.143 g/g
Feed to Conversion Ratio: Day 00 - 35 1.523 g/g
Feed to Conversion Ratio: Day 21 - 35 1.685 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=90.91 P1=9.09 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=85.19 P1=14.81 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 7.23 pH
Litter at Day 21 7.52 pH
Litter at Day 35 8.15 pH
Mean Abdominal fat Yield 1.48 %
Mean Abdominal fat weight 40.32 g
Mean Breast Yield 20.25 %
Mean Breast weight 552.35 g
Mean CRP at Day 07 1.2879 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 2107 g
Mean Carcass Yield 77.3 %
Mean HPT at Day 07 0.81562 ng/ml
Mean HPT at Day 21 0.84695 ng/ml
Mean HPT at Day 35 0.83272 ng/ml
Mean LPS at Day 07 6.1533 ng/L
Mean LPS at Day 21 4.7107 ng/L
Mean LPS at Day 35 5.6708 ng/L
Mean Legs Yield 19.86 %
Mean Legs weight 540.47 g
Mean TBARS 0.12 mg MDA/kg
Mean carcass body weight 2724.2 g
Mean feather cortisol at Day 07 14.312 pg/mg
Mean feather cortisol at Day 21 19.388 pg/mg
Mean feather cortisol at Day 35 31.233 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB24 None

Sample metadata

Marker Measurement Units
Animal code CB24.05 None
Breed Cobb None
C-Reactive protein 0.62 pg/ml
Chicken body weight 247 g
Feather cortisol 8.51 pg/mg
Haptoglobin 78.82 ng/ml
Lipopolysaccharide 31.53 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None