MGYG000308391

Taxonomy

Hungatella pullicola Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Hungatella > Hungatella pullicola

Cluster representative

MGYG000319262

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319262 on MGnify
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Annotations

MGYG000308391’s cluster representative genome MGYG000319262 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319262 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308391 Copy API Endpoint

MGYG000308391’s cluster representative (MGYG000319262) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319262’s sequence. Because MGYG000308391 has been clustered with MGYG000319262 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308391.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319262

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10455476	SAMEA112904798	Probiotic
0.98	SAMEA10104961	SAMEA112904891	Probiotic
0.98	SAMEA7025245	SAMEA112904855	Probiotic
0.98	SAMEA7571766	SAMEA112905028	Control
0.97	SAMEA7025234	SAMEA112905098	Control
0.97	SAMEA10158026	SAMEA112905254	Control
0.97	SAMEA7025263	SAMEA112905147	Control
0.97	SAMEA10454443	SAMEA112905155	Probiotic
0.97	SAMEA10104995	SAMEA112904969	Prebiotic
0.97	SAMEA10454444	SAMEA112905185	Probiotic