HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904969: a HoloFood chicken host

Data available for SAMEA112904969


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904969 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904969, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.82 g
Average Daily Feed intake: Day 00 - 35 94.41 g
Average Daily Feed intake: Day 07 - 21 76.23 g
Average Daily Feed intake: Day 21 - 35 153.04 g
Average Daily Gain: Day 00 - 07 20 g
Average Daily Gain: Day 00 - 35 61.84 g
Average Daily Gain: Day 07 - 21 55.17 g
Average Daily Gain: Day 21 - 35 89.42 g
Average European Performance Efficiency Factor: Day 00 - 07 183.39 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.382 None
Average Feed to Conversion Ratio: Day 07 - 21 1.382 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 44.97 g
Average body weight at day 07 185 g
Average body weight at day 21 957.35 g
Average body weight at day 35 2209.3 g
European Performance Efficiency Factor: Day 00 - 35 394.9 None
European Performance Efficiency Factor: Day 07 - 21 399.27 None
European Performance Efficiency Factor: Day 21 - 35 507.12 None
FCR (not corrected): Day 00 - 07 1.091 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.553 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.771 None
Feed to Conversion Ratio: Day 00 - 07 1.091 g/g
Feed to Conversion Ratio: Day 00 - 35 1.527 g/g
Feed to Conversion Ratio: Day 21 - 35 1.711 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=96.30 P1=3.70 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.79 pH
Litter at Day 21 7.58 pH
Litter at Day 35 8.02 pH
Mean Abdominal fat Yield 1.44 %
Mean Abdominal fat weight 38.83 g
Mean Breast Yield 19.45 %
Mean Breast weight 507.72 g
Mean CRP at Day 07 2.1724 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1966.7 g
Mean Carcass Yield 75.12 %
Mean HPT at Day 07 1.8129 ng/ml
Mean HPT at Day 21 0.70597 ng/ml
Mean HPT at Day 35 0.89459 ng/ml
Mean LPS at Day 07 7.5098 ng/L
Mean LPS at Day 21 4.6164 ng/L
Mean LPS at Day 35 5.3518 ng/L
Mean Legs Yield 19.53 %
Mean Legs weight 511.02 g
Mean TBARS 0.0833 mg MDA/kg
Mean carcass body weight 2622.5 g
Mean feather cortisol at Day 07 12.083 pg/mg
Mean feather cortisol at Day 21 26.573 pg/mg
Mean feather cortisol at Day 35 18.387 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 2.94 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 2.94 %
Pen code CB16 None

Sample metadata

Marker Measurement Units
Animal code CB16.06 None
Breed Cobb None
C-Reactive protein 4.62 pg/ml
Chicken body weight 239.3 g
Feather cortisol 6.36 pg/mg
Haptoglobin 1418.6 ng/ml
Lipopolysaccharide 52.27 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None