MGYG000320869

Taxonomy

Anaerotignum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Anaerotignaceae > Anaerotignum

Cluster representative

MGYG000320869

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320869 on MGnify
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Annotations

MGYG000320869’s cluster representative genome MGYG000320869 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320869 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320869 Copy API Endpoint

MGYG000320869’s cluster representative (MGYG000320869) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320869’s sequence. Because MGYG000320869 has been clustered with MGYG000320869 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320869.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320869

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA9449853	SAMEA112904867	Probiotic
1.00	SAMEA14099421	SAMEA112905128	Control
1.00	SAMEA7697592	SAMEA112904737	Control
1.00	SAMEA14095989	SAMEA112904946	Prebiotic
1.00	SAMEA7571827	SAMEA112905382	Probiotic
1.00	SAMEA7722476	SAMEA112904871	Control
1.00	SAMEA7697609	SAMEA112905326	Probiotic
1.00	SAMEA10105011	SAMEA112904889	Prebiotic
1.00	SAMEA7571794	SAMEA112904960	Prebiotic
1.00	SAMEA10104968	SAMEA112905092	Prebiotic