HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904889: a HoloFood chicken host

Data available for SAMEA112904889


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904889 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904889, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.68 g
Average Daily Feed intake: Day 00 - 35 77.43 g
Average Daily Feed intake: Day 07 - 21 63.71 g
Average Daily Feed intake: Day 21 - 35 123.27 g
Average Daily Gain: Day 00 - 07 18.76 g
Average Daily Gain: Day 00 - 35 52.33 g
Average Daily Gain: Day 07 - 21 47.38 g
Average Daily Gain: Day 21 - 35 74.07 g
Average European Performance Efficiency Factor: Day 00 - 07 178.75 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.359 None
Average Feed to Conversion Ratio: Day 07 - 21 1.345 g/g
Average Mortality without culleds: Day 07 - 21 2.5 %
Average body weight at day 00 38.72 g
Average body weight at day 07 170 g
Average body weight at day 21 833.33 g
Average body weight at day 35 1870.4 g
European Performance Efficiency Factor: Day 00 - 35 344.84 None
European Performance Efficiency Factor: Day 07 - 21 343.58 None
European Performance Efficiency Factor: Day 21 - 35 445.13 None
FCR (not corrected): Day 00 - 07 1.049 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.486 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.664 None
Feed to Conversion Ratio: Day 00 - 07 1.049 g/g
Feed to Conversion Ratio: Day 00 - 35 1.48 g/g
Feed to Conversion Ratio: Day 21 - 35 1.664 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=93.94 P1=6.06 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=88.89 P1=7.41 P2=3.70 P3=0.00 P4=0.00 %
Litter at Day 07 7.24 pH
Litter at Day 21 7.64 pH
Litter at Day 35 6.88 pH
Mean Abdominal fat Yield 1.48 %
Mean Abdominal fat weight 32.57 g
Mean Breast Yield 18.58 %
Mean Breast weight 410.02 g
Mean CRP at Day 07 1.6915 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1692 g
Mean Carcass Yield 76.68 %
Mean HPT at Day 07 2.75 ng/ml
Mean HPT at Day 21 0.70502 ng/ml
Mean HPT at Day 35 1.1803 ng/ml
Mean LPS at Day 07 6.4409 ng/L
Mean LPS at Day 21 5.1094 ng/L
Mean LPS at Day 35 5.733 ng/L
Mean Legs Yield 20.23 %
Mean Legs weight 445.8 g
Mean TBARS 0.1 mg MDA/kg
Mean carcass body weight 2204.2 g
Mean feather cortisol at Day 07 11.633 pg/mg
Mean feather cortisol at Day 21 11.488 pg/mg
Mean feather cortisol at Day 35 12.593 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 2.5 %
Mortality: Day 21 - 35 0 %
Pen code CB21 None

Sample metadata

Marker Measurement Units
Animal code CB21.16 None
Breed Ross None
C-Reactive protein 0.68 pg/ml
Chicken body weight 1687.2 g
Feather cortisol 18.02 pg/mg
Haptoglobin 545.75 ng/ml
Lipopolysaccharide 38.73 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None