HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904960: a HoloFood chicken host

Data available for SAMEA112904960


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has histological data Has histological data
Has host genomic data Has host genomic data
Has transcriptome data Has transcriptome data
View 12 derived samples
API endpoint
/api/animals/SAMEA112904960 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904960, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.2 g
Average Daily Feed intake: Day 00 - 35 89.31 g
Average Daily Feed intake: Day 07 - 21 64.09 g
Average Daily Feed intake: Day 21 - 35 154.4 g
Average Daily Gain: Day 00 - 07 16.9 g
Average Daily Gain: Day 00 - 35 53.04 g
Average Daily Gain: Day 07 - 21 46.55 g
Average Daily Gain: Day 21 - 35 77.6 g
Average European Performance Efficiency Factor: Day 00 - 07 148.82 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.377 None
Average Feed to Conversion Ratio: Day 07 - 21 1.377 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.71 g
Average body weight at day 07 157.03 g
Average body weight at day 21 808.79 g
Average body weight at day 35 1895.2 g
European Performance Efficiency Factor: Day 00 - 35 315.05 None
European Performance Efficiency Factor: Day 07 - 21 338.15 None
European Performance Efficiency Factor: Day 21 - 35 390.06 None
FCR (not corrected): Day 00 - 07 1.136 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.684 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.99 None
Feed to Conversion Ratio: Day 00 - 07 1.136 g/g
Feed to Conversion Ratio: Day 00 - 35 1.684 g/g
Feed to Conversion Ratio: Day 21 - 35 1.99 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=91.18 P1=8.82 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=69.23 P1=19.23 P2=11.54 P3=0.00 P4=0.00 %
Litter at Day 07 5.76 pH
Litter at Day 21 7.21 pH
Litter at Day 35 7.04 pH
Mean Abdominal fat Yield 1.6 %
Mean Abdominal fat weight 34.47 g
Mean Breast Yield 18.44 %
Mean Breast weight 395.37 g
Mean CRP at Day 07 1.1803 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1587.8 g
Mean Carcass Yield 74.33 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.74922 ng/ml
Mean HPT at Day 35 0.6764 ng/ml
Mean LPS at Day 07 3.2804 ng/L
Mean LPS at Day 21 3.9569 ng/L
Mean LPS at Day 35 6.784 ng/L
Mean Legs Yield 20 %
Mean Legs weight 426.73 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 2136.7 g
Mean feather cortisol at Day 07 19.803 pg/mg
Mean feather cortisol at Day 21 14.688 pg/mg
Mean feather cortisol at Day 35 16.253 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA24 None

Sample metadata

Marker Measurement Units
Animal code CA24.16 None
Breed Ross None
C-Reactive protein 0.68 pg/ml
Chicken body weight 1940.2 g
Feather cortisol 11.38 pg/mg
Haptoglobin 12.39 ng/ml
Lipopolysaccharide 47.85 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None