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MGYG000320865

Details for MGYG000320865, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
AM51-8 sp900761925 Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > AM51-8 > AM51-8 sp900761925
Cluster representative

MGYG000319563

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319563 on MGnify
 Show other genomes in cluster
Annotations

MGYG000320865’s cluster representative genome MGYG000319563 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319563 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320865 Copy API Endpoint
Samples containing this genome

MGYG000320865’s cluster representative (MGYG000319563) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319563’s sequence. Because MGYG000320865 has been clustered with MGYG000319563 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320865.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319563

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Containment Sample accession Animal accession Treatment
0.92 SAMEA7025274 Probiotic
0.92 SAMEA7025263 Control
0.92 SAMEA7025254 Prebiotic
0.92 SAMEA10105037 Probiotic
0.92 SAMEA7697592 Control
0.92 SAMEA10104993 Prebiotic
0.92 SAMEA7571767 Control
0.91 SAMEA10104938 Prebiotic
0.91 SAMEA14099424 Prebiotic
0.91 SAMEA7025249 Prebiotic