HoloFood Data Portal

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MGYG000320851

Details for MGYG000320851, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Onthoplasma Bacteria > Firmicutes_A > Clostridia > Christensenellales > UBA1242 > Onthoplasma
Cluster representative

MGYG000313962

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313962 on MGnify
 Show other genomes in cluster
Annotations

MGYG000320851’s cluster representative genome MGYG000313962 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313962 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320851 Copy API Endpoint
Samples containing this genome

MGYG000320851’s cluster representative (MGYG000313962) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313962’s sequence. Because MGYG000320851 has been clustered with MGYG000313962 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320851.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313962

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Containment Sample accession Animal accession Treatment
1.00 SAMEA7571778 Control
0.99 SAMEA7571794 Prebiotic
0.99 SAMEA7697592 Control
0.96 SAMEA7697584 Control
0.89 SAMEA10104941 Probiotic
0.87 SAMEA9449860 Control
0.84 SAMEA10159267 Control
0.82 SAMEA10104968 Prebiotic
0.82 SAMEA7697591 Probiotic
0.80 SAMEA7025245 Probiotic