MGYG000320416

Taxonomy

Onthousia Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Onthousia

Cluster representative

MGYG000315964

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315964 on MGnify
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Annotations

MGYG000320416’s cluster representative genome MGYG000315964 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315964 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320416 Copy API Endpoint

MGYG000320416’s cluster representative (MGYG000315964) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315964’s sequence. Because MGYG000320416 has been clustered with MGYG000315964 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320416.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315964

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.22	SAMEA9449922	SAMEA112904890	Control
0.22	SAMEA7025254	SAMEA112904883	Prebiotic
0.22	SAMEA10159198	SAMEA112905065	Prebiotic
0.21	SAMEA10455479	SAMEA112904776	Prebiotic
0.21	SAMEA10104938	SAMEA112904831	Prebiotic
0.21	SAMEA9449951	SAMEA112904792	Prebiotic
0.21	SAMEA9449879	SAMEA112905323	Probiotic
0.21	SAMEA9449870	SAMEA112905101	Prebiotic
0.21	SAMEA7025262	SAMEA112905328	Control
0.21	SAMEA10454449	SAMEA112905153	Prebiotic