HoloFood Data Portal

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MGYG000319695

Details for MGYG000319695, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Butyricicoccus avistercoris Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Butyricicoccaceae > Butyricicoccus > Butyricicoccus avistercoris
Cluster representative

MGYG000317533

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317533 on MGnify
 Show other genomes in cluster
Annotations

MGYG000319695’s cluster representative genome MGYG000317533 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317533 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319695 Copy API Endpoint
Samples containing this genome

MGYG000319695’s cluster representative (MGYG000317533) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317533’s sequence. Because MGYG000319695 has been clustered with MGYG000317533 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319695.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317533

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Containment Sample accession Animal accession Treatment
0.66 SAMEA7025251 Control
0.62 SAMEA7571794 Prebiotic
0.61 SAMEA9449892 Probiotic
0.57 SAMEA10104922 Prebiotic
0.57 SAMEA7722479 Prebiotic
0.52 SAMEA10455487 Control
0.52 SAMEA10145597 Control
0.52 SAMEA7697630 Control
0.51 SAMEA7025289 Control
0.50 SAMEA10455485 Control