MGYG000319654

Taxonomy

UBA11471 sp900542765 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > UBA11471 > UBA11471 > UBA11471 sp900542765

Cluster representative

MGYG000315739

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315739 on MGnify
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Annotations

MGYG000319654’s cluster representative genome MGYG000315739 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315739 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319654 Copy API Endpoint

MGYG000319654’s cluster representative (MGYG000315739) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315739’s sequence. Because MGYG000319654 has been clustered with MGYG000315739 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319654.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315739

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10105039	SAMEA112905019	Probiotic
1.00	SAMEA7025271	SAMEA112905138	Probiotic
1.00	SAMEA7025283	SAMEA112904873	Control
1.00	SAMEA10105024	SAMEA112905120	Control
1.00	SAMEA7571848	SAMEA112905284	Prebiotic
1.00	SAMEA10145599	SAMEA112905287	Control
1.00	SAMEA7025287	SAMEA112905268	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA10454449	SAMEA112905153	Prebiotic
1.00	SAMEA14409936	SAMEA112904743	Control