HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905268: a HoloFood chicken host

Data available for SAMEA112905268


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112905268 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905268, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 23.1 g
Average Daily Feed intake: Day 00 - 35 77.68 g
Average Daily Feed intake: Day 07 - 21 65.19 g
Average Daily Feed intake: Day 21 - 35 121.03 g
Average Daily Gain: Day 00 - 07 23.11 g
Average Daily Gain: Day 00 - 35 53.54 g
Average Daily Gain: Day 07 - 21 49.22 g
Average Daily Gain: Day 21 - 35 73.08 g
Average European Performance Efficiency Factor: Day 00 - 07 219.44 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.324 None
Average Feed to Conversion Ratio: Day 07 - 21 1.324 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 45.56 g
Average body weight at day 07 207.35 g
Average body weight at day 21 896.43 g
Average body weight at day 35 1919.6 g
European Performance Efficiency Factor: Day 00 - 35 350.11 None
European Performance Efficiency Factor: Day 07 - 21 371.61 None
European Performance Efficiency Factor: Day 21 - 35 441.29 None
FCR (not corrected): Day 00 - 07 1.03 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.456 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.656 None
Feed to Conversion Ratio: Day 00 - 07 0.999 g/g
Feed to Conversion Ratio: Day 00 - 35 1.451 g/g
Feed to Conversion Ratio: Day 21 - 35 1.656 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=52.38 P1=19.05 P2=28.57 P3=0.00 P4=0.00 %
Litter at Day 07 5.79 pH
Litter at Day 21 7.9 pH
Litter at Day 35 8.36 pH
Mean Abdominal fat Yield 1.17 %
Mean Abdominal fat weight 24.4 g
Mean Breast Yield 15.76 %
Mean Breast weight 315.95 g
Mean CRP at Day 07 1.6733 pg/mg
Mean CRP at Day 21 2.0273 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1492.2 g
Mean Carcass Yield 74.94 %
Mean HPT at Day 07 0.81246 ng/ml
Mean HPT at Day 21 0.76564 ng/ml
Mean HPT at Day 35 0.59161 ng/ml
Mean LPS at Day 07 6.5164 ng/L
Mean LPS at Day 21 2.9732 ng/L
Mean LPS at Day 35 6.8731 ng/L
Mean Legs Yield 21.8 %
Mean Legs weight 432.82 g
Mean TBARS 0.04 mg MDA/kg
Mean carcass body weight 1991.7 g
Mean feather cortisol at Day 07 17.257 pg/mg
Mean feather cortisol at Day 21 3.485 pg/mg
Mean feather cortisol at Day 35 20.952 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 5.13 %
Mortality: Day 00 - 35 5.13 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CC21 None

Sample metadata

Marker Measurement Units
Animal code CC21.15 None
Breed Ross None
C-Reactive protein 0.84 pg/ml
Chicken body weight 2540 g
Feather cortisol 15.35 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 53.05 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None