MGYG000310858

Taxonomy

Anaeromassilibacillus stercoravium Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Anaeromassilibacillus > Anaeromassilibacillus stercoravium

Cluster representative

MGYG000309509

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000309509 on MGnify
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Annotations

MGYG000310858’s cluster representative genome MGYG000309509 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000309509 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000310858 Copy API Endpoint

MGYG000310858’s cluster representative (MGYG000309509) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000309509’s sequence. Because MGYG000310858 has been clustered with MGYG000309509 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000310858.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000309509

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025272	SAMEA112905356	Prebiotic
1.00	SAMEA7025267	SAMEA112904847	Control
1.00	SAMEA7697588	SAMEA112905360	Probiotic
0.99	SAMEA10104954	SAMEA112905000	Control
0.99	SAMEA10104926	SAMEA112905372	Prebiotic
0.99	SAMEA7025252	SAMEA112905079	Prebiotic
0.99	SAMEA10104976	SAMEA112904771	Control
0.99	SAMEA7722473	SAMEA112905065	Prebiotic
0.99	SAMEA7025255	SAMEA112904988	Prebiotic
0.99	SAMEA7697613	SAMEA112905262	Prebiotic