HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905079: a HoloFood chicken host

Data available for SAMEA112905079


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112905079 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905079, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.2 g
Average Daily Feed intake: Day 00 - 35 89.31 g
Average Daily Feed intake: Day 07 - 21 64.09 g
Average Daily Feed intake: Day 21 - 35 154.4 g
Average Daily Gain: Day 00 - 07 16.9 g
Average Daily Gain: Day 00 - 35 53.04 g
Average Daily Gain: Day 07 - 21 46.55 g
Average Daily Gain: Day 21 - 35 77.6 g
Average European Performance Efficiency Factor: Day 00 - 07 148.82 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.377 None
Average Feed to Conversion Ratio: Day 07 - 21 1.377 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.71 g
Average body weight at day 07 157.03 g
Average body weight at day 21 808.79 g
Average body weight at day 35 1895.2 g
European Performance Efficiency Factor: Day 00 - 35 315.05 None
European Performance Efficiency Factor: Day 07 - 21 338.15 None
European Performance Efficiency Factor: Day 21 - 35 390.06 None
FCR (not corrected): Day 00 - 07 1.136 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.684 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.99 None
Feed to Conversion Ratio: Day 00 - 07 1.136 g/g
Feed to Conversion Ratio: Day 00 - 35 1.684 g/g
Feed to Conversion Ratio: Day 21 - 35 1.99 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=91.18 P1=8.82 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=69.23 P1=19.23 P2=11.54 P3=0.00 P4=0.00 %
Litter at Day 07 5.76 pH
Litter at Day 21 7.21 pH
Litter at Day 35 7.04 pH
Mean Abdominal fat Yield 1.6 %
Mean Abdominal fat weight 34.47 g
Mean Breast Yield 18.44 %
Mean Breast weight 395.37 g
Mean CRP at Day 07 1.1803 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1587.8 g
Mean Carcass Yield 74.33 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.74922 ng/ml
Mean HPT at Day 35 0.6764 ng/ml
Mean LPS at Day 07 3.2804 ng/L
Mean LPS at Day 21 3.9569 ng/L
Mean LPS at Day 35 6.784 ng/L
Mean Legs Yield 20 %
Mean Legs weight 426.73 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 2136.7 g
Mean feather cortisol at Day 07 19.803 pg/mg
Mean feather cortisol at Day 21 14.688 pg/mg
Mean feather cortisol at Day 35 16.253 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA24 None

Sample metadata

Marker Measurement Units
Animal code CA24.01 None
Breed Ross None
C-Reactive protein 3.29 pg/ml
Chicken body weight 180 g
Feather cortisol 8.85 pg/mg
Haptoglobin 36.18 ng/ml
Lipopolysaccharide 8.2 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None