MGYG000308810

Taxonomy

Faecalibacterium faecigallinarum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Faecalibacterium > Faecalibacterium faecigallinarum

Cluster representative

MGYG000319711

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319711 on MGnify
 Show other genomes in cluster

Annotations

MGYG000308810’s cluster representative genome MGYG000319711 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319711 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308810 Copy API Endpoint

MGYG000308810’s cluster representative (MGYG000319711) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319711’s sequence. Because MGYG000308810 has been clustered with MGYG000319711 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308810.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319711

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA10105028	SAMEA112905044	Probiotic
0.21	SAMEA9449960	SAMEA112905242	Control
0.21	SAMEA7368187	SAMEA112904873	Control
0.21	SAMEA10104953	SAMEA112904751	Prebiotic
0.21	SAMEA10104927	SAMEA112904910	Prebiotic
0.20	SAMEA10105036	SAMEA112905300	Probiotic
0.20	SAMEA7025272	SAMEA112905356	Prebiotic
0.20	SAMEA10104989	SAMEA112905384	Prebiotic