HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905384: a HoloFood chicken host

Data available for SAMEA112905384


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905384 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905384, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 22.15 g
Average Daily Feed intake: Day 00 - 35 89.32 g
Average Daily Feed intake: Day 07 - 21 76.05 g
Average Daily Feed intake: Day 21 - 35 139.87 g
Average Daily Gain: Day 00 - 07 19.61 g
Average Daily Gain: Day 00 - 35 56.8 g
Average Daily Gain: Day 07 - 21 52.58 g
Average Daily Gain: Day 21 - 35 79.61 g
Average European Performance Efficiency Factor: Day 00 - 07 169.19 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.446 None
Average Feed to Conversion Ratio: Day 07 - 21 1.446 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 44.81 g
Average body weight at day 07 182.05 g
Average body weight at day 21 918.18 g
Average body weight at day 35 2032.7 g
European Performance Efficiency Factor: Day 00 - 35 343.08 None
European Performance Efficiency Factor: Day 07 - 21 363.52 None
European Performance Efficiency Factor: Day 21 - 35 439.37 None
FCR (not corrected): Day 00 - 07 1.146 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.604 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.823 None
Feed to Conversion Ratio: Day 00 - 07 1.13 g/g
Feed to Conversion Ratio: Day 00 - 35 1.573 g/g
Feed to Conversion Ratio: Day 21 - 35 1.757 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=87.88 P1=12.12 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=96.15 P1=3.85 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.85 pH
Litter at Day 21 6.46 pH
Litter at Day 35 5.76 pH
Mean Abdominal fat Yield 1.57 %
Mean Abdominal fat weight 36.95 g
Mean Breast Yield 21.2 %
Mean Breast weight 497.43 g
Mean CRP at Day 07 2.0705 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1799 g
Mean Carcass Yield 76.52 %
Mean HPT at Day 07 1.6397 ng/ml
Mean HPT at Day 21 0.83166 ng/ml
Mean HPT at Day 35 0.73642 ng/ml
Mean LPS at Day 07 7.1949 ng/L
Mean LPS at Day 21 4.7324 ng/L
Mean LPS at Day 35 5.7338 ng/L
Mean Legs Yield 19.26 %
Mean Legs weight 452.97 g
Mean TBARS 0.14 mg MDA/kg
Mean carcass body weight 2351.7 g
Mean feather cortisol at Day 07 8.2483 pg/mg
Mean feather cortisol at Day 21 28.103 pg/mg
Mean feather cortisol at Day 35 28.482 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 3.03 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 3.03 %
Pen code CB14 None

Sample metadata

Marker Measurement Units
Animal code CB14.03 None
Breed Cobb None
C-Reactive protein 4.41 pg/ml
Chicken body weight 198.6 g
Feather cortisol 7.05 pg/mg
Haptoglobin 614.47 ng/ml
Lipopolysaccharide 56.75 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None