MGYG000308439

Taxonomy

Eisenbergiella merdavium Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Eisenbergiella > Eisenbergiella merdavium

Cluster representative

MGYG000316151

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316151 on MGnify
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Annotations

MGYG000308439’s cluster representative genome MGYG000316151 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316151 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308439 Copy API Endpoint

MGYG000308439’s cluster representative (MGYG000316151) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316151’s sequence. Because MGYG000308439 has been clustered with MGYG000316151 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308439.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316151

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571838	SAMEA112905090	Control
1.00	SAMEA9449835	SAMEA112904998	Probiotic
1.00	SAMEA10105028	SAMEA112905044	Probiotic
1.00	SAMEA10454447	SAMEA112904740	Prebiotic
1.00	SAMEA7025279	SAMEA112904909	Probiotic
1.00	SAMEA7697634	SAMEA112904913	Control
1.00	SAMEA10104921	SAMEA112905172	Prebiotic
1.00	SAMEA10104973	SAMEA112904987	Probiotic
1.00	SAMEA7571806	SAMEA112904804	Control
1.00	SAMEA7722474	SAMEA112904967	Prebiotic