HoloFood Data Portal

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Details for MGYG000308388, a genome assembled from HoloFood chicken metagenomes

Genome details
Egerieicola faecale Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Egerieicola > Egerieicola faecale
Cluster representative


Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312757 on MGnify
 Show other genomes in cluster

MGYG000308388’s cluster representative genome MGYG000312757 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312757 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308388 Copy API Endpoint
Samples containing this genome

MGYG000308388’s cluster representative (MGYG000312757) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312757’s sequence. Because MGYG000308388 has been clustered with MGYG000312757 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308388.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312757

 Download all as TSV
Containment Sample accession Animal accession Treatment
0.98 SAMEA7025234 Control
0.97 SAMEA9449873 Prebiotic
0.97 SAMEA9449854 Prebiotic
0.97 SAMEA10104932 Control
0.97 SAMEA10105037 Probiotic
0.96 SAMEA7571770 Probiotic
0.96 SAMEA10158026 Control
0.96 SAMEA7722473 Prebiotic
0.96 SAMEA10145599 Control
0.96 SAMEA7697584 Control