MGYG000308384

Taxonomy

Bifidobacterium pullorum_B Bacteria > Actinobacteriota > Actinomycetia > Actinomycetales > Bifidobacteriaceae > Bifidobacterium > Bifidobacterium pullorum_B

Cluster representative

MGYG000316616

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316616 on MGnify
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Annotations

MGYG000308384’s cluster representative genome MGYG000316616 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316616 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308384 Copy API Endpoint

MGYG000308384’s cluster representative (MGYG000316616) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316616’s sequence. Because MGYG000308384 has been clustered with MGYG000316616 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308384.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316616

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA9449907	SAMEA112905341	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA7571847	SAMEA112905358	Prebiotic
1.00	SAMEA7025260	SAMEA112905317	Prebiotic
1.00	SAMEA7571870	SAMEA112905255	Prebiotic
1.00	SAMEA7697576	SAMEA112904922	Prebiotic
1.00	SAMEA7025277	SAMEA112905229	Control
1.00	SAMEA7025259	SAMEA112905304	Prebiotic
1.00	SAMEA7025250	SAMEA112905214	Control
1.00	SAMEA10104957	SAMEA112904999	Control