MGYG000320476

Taxonomy

Faecimonas Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Faecimonas

Cluster representative

MGYG000310373

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310373 on MGnify
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Annotations

MGYG000320476’s cluster representative genome MGYG000310373 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310373 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320476 Copy API Endpoint

MGYG000320476’s cluster representative (MGYG000310373) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310373’s sequence. Because MGYG000320476 has been clustered with MGYG000310373 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320476.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310373

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.25	SAMEA9449853	SAMEA112904867	Probiotic
0.25	SAMEA9449908	SAMEA112904736	Prebiotic
0.24	SAMEA10105045	SAMEA112905221	Control
0.24	SAMEA10105015	SAMEA112904826	Probiotic
0.24	SAMEA10104992	SAMEA112905146	Prebiotic
0.24	SAMEA10105011	SAMEA112904889	Prebiotic
0.24	SAMEA10455493	SAMEA112905037	Probiotic
0.24	SAMEA10105042	SAMEA112905339	Probiotic
0.24	SAMEA10105073	SAMEA112905137	Prebiotic
0.24	SAMEA7697592	SAMEA112904737	Control