MGYG000320186

Taxonomy

Bacteroides fragilis Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides fragilis

Cluster representative

MGYG000318281

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318281 on MGnify
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Annotations

MGYG000320186’s cluster representative genome MGYG000318281 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318281 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320186 Copy API Endpoint

MGYG000320186’s cluster representative (MGYG000318281) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318281’s sequence. Because MGYG000320186 has been clustered with MGYG000318281 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320186.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318281

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Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA10104967	SAMEA112905126	Prebiotic
0.99	SAMEA10159265	SAMEA112904949	Probiotic
0.99	SAMEA7571806	SAMEA112904804	Control
0.99	SAMEA14099425	SAMEA112905180	Prebiotic
0.99	SAMEA14095991	SAMEA112904755	Control
0.99	SAMEA10104959	SAMEA112904963	Prebiotic
0.99	SAMEA10105004	SAMEA112904927	Probiotic
0.99	SAMEA10104974	SAMEA112904852	Probiotic
0.99	SAMEA10104964	SAMEA112905009	Control
0.99	SAMEA10105005	SAMEA112904853	Probiotic