HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904927: a HoloFood chicken host

Data available for SAMEA112904927


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904927 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904927, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.78 g
Average Daily Feed intake: Day 00 - 35 91.67 g
Average Daily Feed intake: Day 07 - 21 72.32 g
Average Daily Feed intake: Day 21 - 35 150.61 g
Average Daily Gain: Day 00 - 07 19.46 g
Average Daily Gain: Day 00 - 35 60.76 g
Average Daily Gain: Day 07 - 21 52.01 g
Average Daily Gain: Day 21 - 35 90.16 g
Average European Performance Efficiency Factor: Day 00 - 07 181.87 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.39 None
Average Feed to Conversion Ratio: Day 07 - 21 1.39 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.79 g
Average body weight at day 07 175 g
Average body weight at day 21 903.13 g
Average body weight at day 35 2165.4 g
European Performance Efficiency Factor: Day 00 - 35 382.57 None
European Performance Efficiency Factor: Day 07 - 21 374.05 None
European Performance Efficiency Factor: Day 21 - 35 539.74 None
FCR (not corrected): Day 00 - 07 1.049 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.513 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.67 None
Feed to Conversion Ratio: Day 00 - 07 1.016 g/g
Feed to Conversion Ratio: Day 00 - 35 1.509 g/g
Feed to Conversion Ratio: Day 21 - 35 1.67 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=87.50 P1=12.50 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=68.00 P1=20.00 P2=12.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.45 pH
Litter at Day 21 8.22 pH
Litter at Day 35 8.17 pH
Mean Abdominal fat Yield 1.26 %
Mean Abdominal fat weight 32.97 g
Mean Breast Yield 18.57 %
Mean Breast weight 482.3 g
Mean CRP at Day 07 2.2472 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1957.7 g
Mean Carcass Yield 75.41 %
Mean HPT at Day 07 2.0356 ng/ml
Mean HPT at Day 21 0.70838 ng/ml
Mean HPT at Day 35 0.84648 ng/ml
Mean LPS at Day 07 6.6366 ng/L
Mean LPS at Day 21 4.9043 ng/L
Mean LPS at Day 35 5.4913 ng/L
Mean Legs Yield 20.24 %
Mean Legs weight 525.03 g
Mean TBARS 0.0833 mg MDA/kg
Mean carcass body weight 2595.8 g
Mean feather cortisol at Day 07 12.477 pg/mg
Mean feather cortisol at Day 21 15.798 pg/mg
Mean feather cortisol at Day 35 18.72 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB19 None

Sample metadata

Marker Measurement Units
Animal code CB19.04 None
Breed Ross None
C-Reactive protein 2.14 pg/ml
Chicken body weight 228.2 g
Feather cortisol 6.79 pg/mg
Haptoglobin 494.04 ng/ml
Lipopolysaccharide 42.75 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None