HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905009: a HoloFood chicken host

Data available for SAMEA112905009


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905009 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905009, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 23.36 g
Average Daily Feed intake: Day 00 - 35 86.98 g
Average Daily Feed intake: Day 07 - 21 71.98 g
Average Daily Feed intake: Day 21 - 35 135.94 g
Average Daily Gain: Day 00 - 07 18.42 g
Average Daily Gain: Day 00 - 35 56.92 g
Average Daily Gain: Day 07 - 21 50.68 g
Average Daily Gain: Day 21 - 35 82.41 g
Average European Performance Efficiency Factor: Day 00 - 07 145.2 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.429 None
Average Feed to Conversion Ratio: Day 07 - 21 1.42 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 44.84 g
Average body weight at day 07 173.75 g
Average body weight at day 21 883.33 g
Average body weight at day 35 2037 g
European Performance Efficiency Factor: Day 00 - 35 363.16 None
European Performance Efficiency Factor: Day 07 - 21 347.99 None
European Performance Efficiency Factor: Day 21 - 35 499.56 None
FCR (not corrected): Day 00 - 07 1.268 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.532 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.65 None
Feed to Conversion Ratio: Day 00 - 07 1.268 g/g
Feed to Conversion Ratio: Day 00 - 35 1.528 g/g
Feed to Conversion Ratio: Day 21 - 35 1.65 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=92.59 P1=3.70 P2=3.70 P3=0.00 P4=0.00 %
Litter at Day 07 5.7 pH
Litter at Day 21 7.73 pH
Litter at Day 35 8.2 pH
Mean Abdominal fat Yield 1.58 %
Mean Abdominal fat weight 37.67 g
Mean Breast Yield 20.1 %
Mean Breast weight 486.25 g
Mean CRP at Day 07 2.1585 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1823.8 g
Mean Carcass Yield 76.01 %
Mean HPT at Day 07 1.2031 ng/ml
Mean HPT at Day 21 0.7467 ng/ml
Mean HPT at Day 35 0.81156 ng/ml
Mean LPS at Day 07 7.0477 ng/L
Mean LPS at Day 21 4.3509 ng/L
Mean LPS at Day 35 5.8143 ng/L
Mean Legs Yield 19.38 %
Mean Legs weight 464.32 g
Mean TBARS 0.0533 mg MDA/kg
Mean carcass body weight 2397.5 g
Mean feather cortisol at Day 07 8.1217 pg/mg
Mean feather cortisol at Day 21 9.5017 pg/mg
Mean feather cortisol at Day 35 8.3633 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 2.5 %
Mortality: Day 21 - 35 0 %
Pen code CB06 None

Sample metadata

Marker Measurement Units
Animal code CB06.17 None
Breed Cobb None
C-Reactive protein 0 pg/ml
Chicken body weight 2434.2 g
Feather cortisol 8 pg/mg
Haptoglobin 123.2 ng/ml
Lipopolysaccharide 46.96 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None