MGYG000319309

Taxonomy

Borkfalkia sp904373255 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Borkfalkia > Borkfalkia sp904373255

Cluster representative

MGYG000316491

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316491 on MGnify
 Show other genomes in cluster

Annotations

MGYG000319309’s cluster representative genome MGYG000316491 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316491 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319309 Copy API Endpoint

MGYG000319309’s cluster representative (MGYG000316491) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316491’s sequence. Because MGYG000319309 has been clustered with MGYG000316491 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319309.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316491

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571791	SAMEA112904934	Control
1.00	SAMEA14409936	SAMEA112904743	Control
1.00	SAMEA9449907	SAMEA112905341	Prebiotic
1.00	SAMEA7697588	SAMEA112905360	Probiotic
1.00	SAMEA7697594	SAMEA112904978	Probiotic
1.00	SAMEA9449856	SAMEA112905272	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA7697598	SAMEA112905174	Control
0.99	SAMEA7697636	SAMEA112905078	Prebiotic
0.99	SAMEA10104961	SAMEA112904891	Probiotic