HoloFood Data Portal

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MGYG000316437

Details for MGYG000316437, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia merdigallinarum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia > Blautia merdigallinarum
Cluster representative

MGYG000320239

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320239 on MGnify
 Show other genomes in cluster
Annotations

MGYG000316437’s cluster representative genome MGYG000320239 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320239 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000316437 Copy API Endpoint
Samples containing this genome

MGYG000316437’s cluster representative (MGYG000320239) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320239’s sequence. Because MGYG000316437 has been clustered with MGYG000320239 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000316437.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320239

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Containment Sample accession Animal accession Treatment
0.42 SAMEA10159248 Prebiotic
0.42 SAMEA10145562 Control
0.42 SAMEA10105058 Control
0.42 SAMEA9449879 Probiotic
0.42 SAMEA10105038 Probiotic
0.41 SAMEA7025260 Prebiotic
0.41 SAMEA9449912 Probiotic
0.41 SAMEA7697580 Probiotic
0.41 SAMEA9449942 Control
0.41 SAMEA7571838 Control