HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904733: a HoloFood chicken host

Data available for SAMEA112904733


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904733 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904733, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 20.04 g
Average Daily Feed intake: Day 00 - 35 78.71 g
Average Daily Feed intake: Day 07 - 21 66.6 g
Average Daily Feed intake: Day 21 - 35 123.2 g
Average Daily Gain: Day 00 - 07 18.3 g
Average Daily Gain: Day 00 - 35 52.09 g
Average Daily Gain: Day 07 - 21 49.28 g
Average Daily Gain: Day 21 - 35 71.8 g
Average European Performance Efficiency Factor: Day 00 - 07 167.11 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.352 None
Average Feed to Conversion Ratio: Day 07 - 21 1.352 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.42 g
Average body weight at day 07 167.5 g
Average body weight at day 21 857.35 g
Average body weight at day 35 1862.5 g
European Performance Efficiency Factor: Day 00 - 35 344.72 None
European Performance Efficiency Factor: Day 07 - 21 364.56 None
European Performance Efficiency Factor: Day 21 - 35 418.41 None
FCR (not corrected): Day 00 - 07 1.095 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.511 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.716 None
Feed to Conversion Ratio: Day 00 - 07 1.095 g/g
Feed to Conversion Ratio: Day 00 - 35 1.511 g/g
Feed to Conversion Ratio: Day 21 - 35 1.716 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=97.06 P1=2.94 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=83.87 P1=9.68 P2=6.45 P3=0.00 P4=0.00 %
Litter at Day 07 8.23 pH
Litter at Day 21 7.24 pH
Litter at Day 35 8.01 pH
Mean Abdominal fat Yield 1.56 %
Mean Abdominal fat weight 34.95 g
Mean Breast Yield 19.74 %
Mean Breast weight 434.92 g
Mean CRP at Day 07 2.1237 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1673 g
Mean Carcass Yield 75.87 %
Mean HPT at Day 07 1.0571 ng/ml
Mean HPT at Day 21 0.85997 ng/ml
Mean HPT at Day 35 0.99296 ng/ml
Mean LPS at Day 07 6.8611 ng/L
Mean LPS at Day 21 4.335 ng/L
Mean LPS at Day 35 5.3138 ng/L
Mean Legs Yield 19.48 %
Mean Legs weight 429.48 g
Mean TBARS 0.1 mg MDA/kg
Mean carcass body weight 2203.3 g
Mean feather cortisol at Day 07 8.14 pg/mg
Mean feather cortisol at Day 21 7.1117 pg/mg
Mean feather cortisol at Day 35 9.55 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB04 None

Sample metadata

Marker Measurement Units
Animal code CB04.06 None
Breed Ross None
C-Reactive protein 5.17 pg/ml
Chicken body weight 207.9 g
Feather cortisol 6.11 pg/mg
Haptoglobin 491.07 ng/ml
Lipopolysaccharide 47.62 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None