HoloFood Data Portal

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MGYG000313012

Details for MGYG000313012, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Heritagella sp905215105 Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Heritagella > Heritagella sp905215105
Cluster representative

MGYG000317148

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317148 on MGnify
 Show other genomes in cluster
Annotations

MGYG000313012’s cluster representative genome MGYG000317148 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317148 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313012 Copy API Endpoint
Samples containing this genome

MGYG000313012’s cluster representative (MGYG000317148) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317148’s sequence. Because MGYG000313012 has been clustered with MGYG000317148 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313012.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317148

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Containment Sample accession Animal accession Treatment
0.98 SAMEA7571780 Control
0.97 SAMEA7722478 Control
0.96 SAMEA10104935 Prebiotic
0.96 SAMEA7571791 Control
0.92 SAMEA7025248 Probiotic
0.89 SAMEA7571767 Control
0.88 SAMEA7697581 Probiotic
0.88 SAMEA7025260 Prebiotic
0.86 SAMEA7571775 Control
0.84 SAMEA7571858 Probiotic