MGYG000312045

Taxonomy

Eisenbergiella merdavium Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Eisenbergiella > Eisenbergiella merdavium

Cluster representative

MGYG000316151

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316151 on MGnify
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Annotations

MGYG000312045’s cluster representative genome MGYG000316151 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316151 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000312045 Copy API Endpoint

MGYG000312045’s cluster representative (MGYG000316151) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316151’s sequence. Because MGYG000312045 has been clustered with MGYG000316151 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000312045.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316151

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA9449910	SAMEA112904894	Probiotic
0.21	SAMEA9449890	SAMEA112904839	Probiotic
0.21	SAMEA7025241	SAMEA112905244	Probiotic
0.21	SAMEA7025281	SAMEA112904979	Probiotic
0.21	SAMEA10159261	SAMEA112904837	Prebiotic
0.21	SAMEA9449914	SAMEA112904779	Probiotic
0.20	SAMEA10105068	SAMEA112905002	Prebiotic
0.20	SAMEA10455493	SAMEA112905037	Probiotic
0.20	SAMEA9449926	SAMEA112904943	Prebiotic