HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904837: a HoloFood chicken host

Data available for SAMEA112904837


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904837 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904837, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.76 g
Average Daily Feed intake: Day 00 - 35 86.37 g
Average Daily Feed intake: Day 07 - 21 69.96 g
Average Daily Feed intake: Day 21 - 35 139.81 g
Average Daily Gain: Day 00 - 07 19.17 g
Average Daily Gain: Day 00 - 35 57.14 g
Average Daily Gain: Day 07 - 21 50.73 g
Average Daily Gain: Day 21 - 35 82.54 g
Average European Performance Efficiency Factor: Day 00 - 07 181.29 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.379 None
Average Feed to Conversion Ratio: Day 07 - 21 1.379 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.9 g
Average body weight at day 07 173.08 g
Average body weight at day 21 883.33 g
Average body weight at day 35 2038.9 g
European Performance Efficiency Factor: Day 00 - 35 368.61 None
European Performance Efficiency Factor: Day 07 - 21 367.9 None
European Performance Efficiency Factor: Day 21 - 35 487.29 None
FCR (not corrected): Day 00 - 07 1.065 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.516 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.694 None
Feed to Conversion Ratio: Day 00 - 07 1.031 g/g
Feed to Conversion Ratio: Day 00 - 35 1.511 g/g
Feed to Conversion Ratio: Day 21 - 35 1.694 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=81.48 P1=18.52 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.55 pH
Litter at Day 21 7.72 pH
Litter at Day 35 8.25 pH
Mean Abdominal fat Yield 1.16 %
Mean Abdominal fat weight 28.23 g
Mean Breast Yield 17.41 %
Mean Breast weight 422.12 g
Mean CRP at Day 07 2.0898 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1824.2 g
Mean Carcass Yield 75.73 %
Mean HPT at Day 07 1.2955 ng/ml
Mean HPT at Day 21 0.85455 ng/ml
Mean HPT at Day 35 0.98845 ng/ml
Mean LPS at Day 07 6.548 ng/L
Mean LPS at Day 21 4.6908 ng/L
Mean LPS at Day 35 5.6681 ng/L
Mean Legs Yield 20.8 %
Mean Legs weight 498.35 g
Mean TBARS 0.1133 mg MDA/kg
Mean carcass body weight 2404.2 g
Mean feather cortisol at Day 07 13.716 pg/mg
Mean feather cortisol at Day 21 12.638 pg/mg
Mean feather cortisol at Day 35 10.533 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB18 None

Sample metadata

Marker Measurement Units
Animal code CB18.04 None
Breed Ross None
C-Reactive protein 0.97 pg/ml
Chicken body weight 224.5 g
Feather cortisol 12.4 pg/mg
Haptoglobin 279.48 ng/ml
Lipopolysaccharide 45.9 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None