HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905002: a HoloFood chicken host

Data available for SAMEA112905002


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112905002 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905002, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.32 g
Average Daily Feed intake: Day 00 - 35 71.73 g
Average Daily Feed intake: Day 07 - 21 60.47 g
Average Daily Feed intake: Day 21 - 35 110.93 g
Average Daily Gain: Day 00 - 07 21.27 g
Average Daily Gain: Day 00 - 35 51.49 g
Average Daily Gain: Day 07 - 21 45.25 g
Average Daily Gain: Day 21 - 35 72.86 g
Average European Performance Efficiency Factor: Day 00 - 07 201.55 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.336 None
Average Feed to Conversion Ratio: Day 07 - 21 1.336 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 43.56 g
Average body weight at day 07 192.43 g
Average body weight at day 21 825.86 g
Average body weight at day 35 1845.8 g
European Performance Efficiency Factor: Day 00 - 35 351.19 None
European Performance Efficiency Factor: Day 07 - 21 338.55 None
European Performance Efficiency Factor: Day 21 - 35 478.49 None
FCR (not corrected): Day 00 - 07 1.023 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.396 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.523 None
Feed to Conversion Ratio: Day 00 - 07 1.002 g/g
Feed to Conversion Ratio: Day 00 - 35 1.393 g/g
Feed to Conversion Ratio: Day 21 - 35 1.523 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=95.24 P1=4.76 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.63 pH
Litter at Day 21 7.66 pH
Litter at Day 35 8.49 pH
Mean Abdominal fat Yield 1.3 %
Mean Abdominal fat weight 26.47 g
Mean Breast Yield 18.03 %
Mean Breast weight 361.3 g
Mean CRP at Day 07 2.1401 pg/mg
Mean CRP at Day 21 1.7206 pg/mg
Mean CRP at Day 35 1.208 pg/mg
Mean Carcass Weight 1560.8 g
Mean Carcass Yield 78.15 %
Mean HPT at Day 07 0.69429 ng/ml
Mean HPT at Day 21 0.69734 ng/ml
Mean HPT at Day 35 0.83627 ng/ml
Mean LPS at Day 07 6.5471 ng/L
Mean LPS at Day 21 3.1747 ng/L
Mean LPS at Day 35 6.5359 ng/L
Mean Legs Yield 20.89 %
Mean Legs weight 417.25 g
Mean TBARS 0.04 mg MDA/kg
Mean carcass body weight 2000 g
Mean feather cortisol at Day 07 7.495 pg/mg
Mean feather cortisol at Day 21 13.003 pg/mg
Mean feather cortisol at Day 35 14.37 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 5 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CC24 None

Sample metadata

Marker Measurement Units
Animal code CC24.01 None
Breed Ross None
C-Reactive protein 1.91 pg/ml
Chicken body weight 166.3 g
Feather cortisol 8.71 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 46.2 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None