MGYG000311341

Taxonomy

Gallimonas gallistercoris Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Gallimonas > Gallimonas gallistercoris

Cluster representative

MGYG000317413

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317413 on MGnify
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Annotations

MGYG000311341’s cluster representative genome MGYG000317413 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317413 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311341 Copy API Endpoint

MGYG000311341’s cluster representative (MGYG000317413) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317413’s sequence. Because MGYG000311341 has been clustered with MGYG000317413 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311341.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317413

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Containment	Sample accession	Animal accession	Treatment
0.27	SAMEA10159265	SAMEA112904949	Probiotic
0.27	SAMEA10105011	SAMEA112904889	Prebiotic
0.26	SAMEA10104925	SAMEA112905338	Control
0.26	SAMEA7571819	SAMEA112905213	Probiotic
0.26	SAMEA10105047	SAMEA112905233	Control
0.26	SAMEA7025271	SAMEA112905138	Probiotic
0.26	SAMEA7571824	SAMEA112905082	Probiotic
0.26	SAMEA7571853	SAMEA112905112	Prebiotic
0.25	SAMEA10104921	SAMEA112905172	Prebiotic
0.25	SAMEA9449947	SAMEA112905276	Prebiotic