MGYG000311184

Taxonomy

Ventrisoma faecale Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Ventrisoma > Ventrisoma faecale

Cluster representative

MGYG000318167

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318167 on MGnify
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Annotations

MGYG000311184’s cluster representative genome MGYG000318167 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318167 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311184 Copy API Endpoint

MGYG000311184’s cluster representative (MGYG000318167) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318167’s sequence. Because MGYG000311184 has been clustered with MGYG000318167 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311184.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318167

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Containment	Sample accession	Animal accession	Treatment
0.97	SAMEA7025249	SAMEA112904823	Prebiotic
0.97	SAMEA10105037	SAMEA112904745	Probiotic
0.97	SAMEA7697597	SAMEA112905231	Probiotic
0.96	SAMEA10104925	SAMEA112905338	Control
0.96	SAMEA7025284	SAMEA112905088	Control
0.96	SAMEA7025261	SAMEA112905342	Probiotic
0.96	SAMEA9449956	SAMEA112904759	Probiotic
0.96	SAMEA7697623	SAMEA112905102	Probiotic
0.96	SAMEA9449952	SAMEA112905334	Probiotic
0.96	SAMEA7571793	SAMEA112905321	Prebiotic