MGYG000311184

Taxonomy

Ventrisoma faecale Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Ventrisoma > Ventrisoma faecale

Cluster representative

MGYG000318167

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318167 on MGnify
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Annotations

MGYG000311184’s cluster representative genome MGYG000318167 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318167 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311184 Copy API Endpoint

MGYG000311184’s cluster representative (MGYG000318167) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318167’s sequence. Because MGYG000311184 has been clustered with MGYG000318167 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311184.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318167

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Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA10104921	SAMEA112905172	Prebiotic
0.99	SAMEA7697599	SAMEA112904961	Control
0.99	SAMEA9449865	SAMEA112904866	Control
0.99	SAMEA7025240	SAMEA112904911	Probiotic
0.99	SAMEA9449957	SAMEA112905027	Probiotic
0.98	SAMEA10105032	SAMEA112904833	Control
0.98	SAMEA10104985	SAMEA112905021	Control
0.98	SAMEA9449944	SAMEA112905357	Control
0.98	SAMEA10105048	SAMEA112905111	Control
0.97	SAMEA7571853	SAMEA112905112	Prebiotic