MGYG000309448

Taxonomy

Borkfalkia stercoripullorum Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Borkfalkia > Borkfalkia stercoripullorum

Cluster representative

MGYG000317548

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317548 on MGnify
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Annotations

MGYG000309448’s cluster representative genome MGYG000317548 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317548 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309448 Copy API Endpoint

MGYG000309448’s cluster representative (MGYG000317548) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317548’s sequence. Because MGYG000309448 has been clustered with MGYG000317548 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309448.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317548

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Containment	Sample accession	Animal accession	Treatment
0.98	SAMEA7025260	SAMEA112905317	Prebiotic
0.98	SAMEA7697602	SAMEA112905015	Probiotic
0.98	SAMEA9449915	SAMEA112905199	Probiotic
0.97	SAMEA10104952	SAMEA112904750	Prebiotic
0.97	SAMEA10454437	SAMEA112905261	Probiotic
0.97	SAMEA9449869	SAMEA112905176	Prebiotic
0.97	SAMEA7697592	SAMEA112904737	Control
0.97	SAMEA7025286	SAMEA112904985	Prebiotic
0.97	SAMEA7571827	SAMEA112905382	Probiotic
0.96	SAMEA7697595	SAMEA112905025	Prebiotic