MGYG000308652

Taxonomy

Mucispirillum Bacteria > Deferribacterota > Deferribacteres > Deferribacterales > Mucispirillaceae > Mucispirillum

Cluster representative

MGYG000315648

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315648 on MGnify
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Annotations

MGYG000308652’s cluster representative genome MGYG000315648 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315648 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308652 Copy API Endpoint

MGYG000308652’s cluster representative (MGYG000315648) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315648’s sequence. Because MGYG000308652 has been clustered with MGYG000315648 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308652.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315648

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697609	SAMEA112905326	Probiotic
1.00	SAMEA7697608	SAMEA112905081	Control
1.00	SAMEA7571832	SAMEA112905299	Control
1.00	SAMEA9449963	SAMEA112905164	Probiotic
1.00	SAMEA10105021	SAMEA112905307	Probiotic
1.00	SAMEA7571845	SAMEA112904735	Control
1.00	SAMEA14409936	SAMEA112904743	Control
1.00	SAMEA7025273	SAMEA112904965	Prebiotic
1.00	SAMEA7697613	SAMEA112905262	Prebiotic
1.00	SAMEA9449933	SAMEA112904886	Prebiotic