MGYG000308648

Taxonomy

Enterocloster excrementigallinarum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Enterocloster > Enterocloster excrementigallinarum

Cluster representative

MGYG000320603

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320603 on MGnify
 Show other genomes in cluster

Annotations

MGYG000308648’s cluster representative genome MGYG000320603 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320603 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308648 Copy API Endpoint

MGYG000308648’s cluster representative (MGYG000320603) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320603’s sequence. Because MGYG000308648 has been clustered with MGYG000320603 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308648.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320603

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA7571801	SAMEA112904766	Probiotic
0.99	SAMEA7025271	SAMEA112905138	Probiotic
0.98	SAMEA10104938	SAMEA112904831	Prebiotic
0.98	SAMEA9449902	SAMEA112904829	Control
0.98	SAMEA7025260	SAMEA112905317	Prebiotic
0.98	SAMEA10145589	SAMEA112904854	Control
0.98	SAMEA10104969	SAMEA112904859	Probiotic
0.98	SAMEA7697613	SAMEA112905262	Prebiotic
0.98	SAMEA7025238	SAMEA112905325	Probiotic
0.98	SAMEA10455473	SAMEA112904945	Probiotic