MGYG000308579

Taxonomy

Intestinimonas pullistercoris Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Oscillospiraceae > Intestinimonas > Intestinimonas pullistercoris

Cluster representative

MGYG000310892

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310892 on MGnify
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Annotations

MGYG000308579’s cluster representative genome MGYG000310892 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310892 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308579 Copy API Endpoint

MGYG000308579’s cluster representative (MGYG000310892) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310892’s sequence. Because MGYG000308579 has been clustered with MGYG000310892 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308579.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310892

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025279	SAMEA112904909	Probiotic
1.00	SAMEA7025280	SAMEA112905349	Probiotic
1.00	SAMEA7571834	SAMEA112905162	Prebiotic
1.00	SAMEA7025253	SAMEA112905350	Prebiotic
1.00	SAMEA7025252	SAMEA112905079	Prebiotic
1.00	SAMEA9449922	SAMEA112904890	Control
1.00	SAMEA7571862	SAMEA112904989	Probiotic
1.00	SAMEA9449833	SAMEA112904807	Probiotic
1.00	SAMEA7571769	SAMEA112904793	Prebiotic
1.00	SAMEA7697588	SAMEA112905360	Probiotic