MGYG000308533

Taxonomy

Merdisoma faecalis Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Merdisoma > Merdisoma faecalis

Cluster representative

MGYG000313060

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313060 on MGnify
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Annotations

MGYG000308533’s cluster representative genome MGYG000313060 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313060 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308533 Copy API Endpoint

MGYG000308533’s cluster representative (MGYG000313060) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313060’s sequence. Because MGYG000308533 has been clustered with MGYG000313060 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308533.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313060

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571787	SAMEA112904931	Probiotic
1.00	SAMEA9449854	SAMEA112905061	Prebiotic
1.00	SAMEA10104914	SAMEA112904915	Control
1.00	SAMEA9449850	SAMEA112905380	Control
1.00	SAMEA9449864	SAMEA112904860	Control
1.00	SAMEA10105004	SAMEA112904927	Probiotic
1.00	SAMEA7025266	SAMEA112905005	Probiotic
1.00	SAMEA7571769	SAMEA112904793	Prebiotic
1.00	SAMEA10455501	SAMEA112905013	Probiotic
1.00	SAMEA7025261	SAMEA112905342	Probiotic