HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

MGYG000308440

Details for MGYG000308440, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia pullistercoris Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia > Blautia pullistercoris
Cluster representative

MGYG000315333

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315333 on MGnify
 Show other genomes in cluster
Annotations

MGYG000308440’s cluster representative genome MGYG000315333 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315333 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308440 Copy API Endpoint
Samples containing this genome

MGYG000308440’s cluster representative (MGYG000315333) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315333’s sequence. Because MGYG000308440 has been clustered with MGYG000315333 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308440.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315333

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Containment Sample accession Animal accession Treatment
0.93 SAMEA10455484 Prebiotic
0.92 SAMEA10104961 Probiotic
0.92 SAMEA14099422 Control
0.90 SAMEA7697598 Control
0.89 SAMEA10105022 Probiotic
0.89 SAMEA10159263 Prebiotic
0.89 SAMEA7025252 Prebiotic
0.89 SAMEA7571801 Probiotic
0.89 SAMEA7722473 Prebiotic
0.89 SAMEA9449867 Control